CATEGORY
Single-cell, Spatial & Cytometry
Single-cell models, spatial transcriptomics and machine-learning cytometry.
All Tools🧬 Biological AI Models💊 AI Drug Discovery🔬 Genomics & Bioinformatics🧫 Single-cell, Spatial & Cytometry🧪 Laboratory Automation & Robotics🖥️ Research GPUs & Servers
26 matching products · 26 products on page 1. Filters search the whole catalog.
Single-Cell & Spatial BiologySpatialData
Python Library · Open Source
Unified data framework and storage format for spatial multi-omics
scverse Consortium
Free Open SourceCell Ranger
Software Pipeline · Proprietary Freeware
The industry-standard analysis pipeline for Chromium single-cell sequencing
10x Genomics
Free to download for 10x Genomics dataGeneformer
Research software / model · Public code / project terms
Transformer representations of single-cell transcriptomes
Theodoris laboratory and collaborators
See project terms; compute costs may applyGiotto Suite
Supporting software · Public code / project terms
Spatial multi-omics processing, analysis and visualization
Dries laboratory and collaborators
See project terms; compute costs may applyUniversal Cell Embeddings
Research software / model · Public code / project terms
Foundation-model embeddings for single-cell expression
Stanford SNAP / UCE contributors
See project terms; compute costs may applycell2location
Research software / model · Public code
Bayesian mapping of cell types in spatial transcriptomics
cell2location contributors
See project licence and access termsCellTypist
Research software / model · Public code
Semi-automatic cell type classification
Teichmann Lab / CellTypist contributors
See project licence and access termsPhenoGraph
Research software / model · Public code
Subpopulation detection in single-cell data
Pe’er Lab / PhenoGraph contributors
See project licence and access termsscvi-tools
Research software / model · Public code
Probabilistic models for single-cell analysis
scverse / scvi-tools contributors
See access and licence terms