Nicheformer

Biological & Workflow Fit

Compute & Hardware

Check selected checkpoint and runtime; no GPU catalog recommendation

Licensing & Academic Use

Check code and model weights separately

Documented Evidence

Peer-reviewed primary method

Use this citation format when referencing Nicheformer in scientific publications and benchmark papers.

@software{nicheformer_2026,
  title = {{Nicheformer}},
  author = {{Theis Lab}},
  year = {2026},
  url = {https://github.com/theislab/nicheformer},
  note = {Indexed on aibioatlas - AI for Biology and Drug Discovery}
}