Loading BioAtlas...
Loading BioAtlas...
Compare biological models, docking engines, and computational workflows side-by-side. Filter by access model, compute footprint, and category to reach an actionable decision table in under a minute.
| Attribute | ＋ Add tool | |||
|---|---|---|---|---|
| Category | Scientific ML Libraries & Supporting Tools | Scientific ML Libraries & Supporting Tools | Scientific ML Libraries & Supporting Tools | — |
| Subcategory | Scientific ML | Conventional or Statistical Baselines | Conventional or Statistical Baselines | — |
| Company | DeepChem contributors | Research / method authors | Research / method authors | — |
| Access mode | Public code | Confirm distribution and exact release | Confirm distribution and exact release | — |
| Licence conditions | Check library, model and dataset terms | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | — |
| Compute requirements | Version and workload dependent; not independently benchmarked | Version and data dependent | Version and data dependent | — |
| Biological application | Not recorded | Not recorded | Not recorded | — |
| Research workflow | Not recorded | Not recorded | Not recorded | — |
| Evidence level | Project documentation; no local benchmark | PEER_REVIEWED_METHOD_OR_CONFERENCE | PEER_REVIEWED_METHOD_OR_CONFERENCE | — |
| Commercial eligibility | Confirm exact code, weights and data terms | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | — |
| Price | See access and licence terms | Verify access and licence | Verify access and licence | — |
| Availability ⓘ | Public code | Method paper or official documentation | Method paper or official documentation | — |
| Features | Deep learning tools for scientific research, Documented research workflow | HMMER 3 scientific method, Query sequences or profile HMM and sequence database, Profile HMM hits and statistical homology significance | MMseqs2 scientific method, Amino acid queries and reference sequence database, Sequence matches, clusters and alignment results | — |
| Entry type | Research software / model | Classical/statistical scientific method | Classical/statistical scientific method | — |
| AI role | Machine-learning software | NON_AI_CLASSICAL | NON_AI_CLASSICAL | — |
| Input data | Scientific datasets and model configuration | Query sequences or profile HMM and sequence database | Amino acid queries and reference sequence database | — |
| Output data | Model-dependent predictions and evaluations | Profile HMM hits and statistical homology significance | Sequence matches, clusters and alignment results | — |
| Validation | Evaluate on representative held-out data | Published method scope; no independent BioAtlas execution or benchmark | Published method scope; no independent BioAtlas execution or benchmark | — |
| Type | Not recorded | Not recorded | Not recorded | — |
| Intended use | Not recorded | Not recorded | Not recorded | — |
| Compatibility | Not recorded | Not recorded | Not recorded | — |