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مقایسه شاخ‌به‌شاخ مدل‌های زیستی، موتورهای داکینگ و پایپ‌لاین‌های محاسباتی. فیلتر بر اساس مدل دسترسی، مصرف پردازشی و دسته‌بندی جهت اخذ تصمیم دقیق در کمتر از یک دقیقه.
| مشخصه | ＋ افزودن ابزار | |||||
|---|---|---|---|---|---|---|
| Category | Single-cell, Spatial & Cytometry | Single-cell, Spatial & Cytometry | Single-cell, Spatial & Cytometry | Single-cell, Spatial & Cytometry | Single-cell, Spatial & Cytometry | — |
| Subcategory | Single-cell Models | Conventional or Statistical Baselines | Conventional or Statistical Baselines | Conventional or Statistical Baselines | Conventional or Statistical Baselines | — |
| Company | Cantini Lab | Research / method authors | Research / method authors | Research / method authors | Research / method authors | — |
| Access mode | Research code or publication | Confirm distribution and exact release | Confirm distribution and exact release | Confirm distribution and exact release | Confirm distribution and exact release | — |
| Licence conditions | Check code and model weights separately | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | — |
| Compute requirements | Check selected checkpoint and runtime; no GPU catalog recommendation | Version and data dependent | Version and data dependent | Version and data dependent | Version and data dependent | — |
| Biological application | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | — |
| Research workflow | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | — |
| Evidence level | Peer-reviewed primary method | OFFICIAL_DOCUMENTATION | PEER_REVIEWED_METHOD_OR_CONFERENCE | PEER_REVIEWED_METHOD_OR_CONFERENCE | PEER_REVIEWED_METHOD_OR_CONFERENCE | — |
| Commercial eligibility | Unknown, requires audit | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | NOT_INDEPENDENTLY_AUDITED | — |
| Price | Check selected model licence | Verify access and licence | Verify access and licence | Verify access and licence | Verify access and licence | — |
| Availability ⓘ | Public research method/code | Method paper or official documentation | Method paper or official documentation | Method paper or official documentation | Method paper or official documentation | — |
| Features | Pretrained scRNA model for embeddings and predicted context-specific gene network hypotheses., Embeddings, gene network predictions | Azimuth (Seurat reference mapping) scientific method, Compatible single-cell expression matrix and named atlas reference, Anchor-based reference map and predicted cell labels | Baysor scientific method, Subcellular in-situ transcript positions and optional cell stain masks, Spatial transcript-informed cell boundaries | BBKNN scientific method, Single-cell latent-space representation and batch labels, Balanced neighbor graph for downstream analysis | CellRank scientific method, Single-cell trajectories, directional velocity or related transition kernels, Terminal state and fate probability hypotheses | — |
| Entry type | Research AI model / method | Classical/statistical scientific method | Classical/statistical scientific method | Classical/statistical scientific method | Classical/statistical scientific method | — |
| AI role | Published biomedical AI method | NON_AI_REFERENCE | NON_AI_STATISTICAL | NON_AI_STATISTICAL | NON_AI_STATISTICAL | — |
| Input data | scRNA expression; gene ID alignment | Compatible single-cell expression matrix and named atlas reference | Subcellular in-situ transcript positions and optional cell stain masks | Single-cell latent-space representation and batch labels | Single-cell trajectories, directional velocity or related transition kernels | — |
| Output data | Embeddings; gene network predictions | Anchor-based reference map and predicted cell labels | Spatial transcript-informed cell boundaries | Balanced neighbor graph for downstream analysis | Terminal state and fate probability hypotheses | — |
| Validation | Requires independent dataset-specific evaluation | Published method scope; no independent BioAtlas execution or benchmark | Published method scope; no independent BioAtlas execution or benchmark | Published method scope; no independent BioAtlas execution or benchmark | Published method scope; no independent BioAtlas execution or benchmark | — |
| Type | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | — |
| Intended use | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | — |
| Compatibility | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | ثبت‌نشده | — |