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Comparez modèles biologiques, moteurs de docking et flux de calcul côte à côte. Filtrez par modèle d'accès, empreinte de calcul et catégorie pour parvenir à une table de décision exploitable en moins d'une minute.
| Attribut | ＋ Ajouter un outil | |
|---|---|---|
| Category | Genomics & Sequence Modeling | — |
| Subcategory | Long-Read Sequencing Correction | — |
| Company | Google Health & PacBio | — |
| Access mode | Open Source | — |
| Licence conditions | BSD-3-Clause | — |
| Compute requirements | Multi-core CPU or NVIDIA GPU (CUDA) | — |
| Biological application | De novo genome assembly, structural variant discovery, and pangenomics | — |
| Research workflow | Raw PacBio subreads -> DeepConsensus inference -> high-accuracy HiFi BAM/FASTQ | — |
| Evidence level | Peer-reviewed publication (Nature Biotechnology 2022) | — |
| Commercial eligibility | Open source release | — |
| Price | Free Open Source | — |
| Availability ⓘ | Available on GitHub and Bioconda | — |
| Features | Deep learning consensus calling across subreads to correct systematic sequencing errors, Increases the yield of Q30 (>99.9% accurate) and Q40 (>99.99% accurate) HiFi reads by up to 40%, Integrated into standard PacBio SMRT Link secondary analysis pipelines, Optimized with GPU acceleration for high-throughput sequencing facilities | — |
| Entry type | Software Tool | — |
| AI role | Signal & Sequence Error Correction | — |
| Input data | Non enregistré | — |
| Output data | Non enregistré | — |
| Validation | Non enregistré | — |
| Type | Neural sequencing consensus caller | — |
| Intended use | Non enregistré | — |
| Compatibility | Non enregistré | — |
| Manufacturer | Google LLC & PacBio | — |
| Integration evidence | https://github.com/google/deepconsensus | — |
| Laboratory handoff | Generates ready-to-assemble reads for clinical and population genomics | — |